Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.53■□□□□ 0.72
LTN1O94822 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTN1O94822 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.53■□□□□ 0.72
LTN1O94822 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LTN1O94822 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LTN1O94822 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LTN1O94822 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
LTN1O94822 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC19.52■□□□□ 0.72
LTN1O94822 PIN4P1-201ENST00000451079 396 ntBASIC19.52■□□□□ 0.72
LTN1O94822 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LTN1O94822 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC19.52■□□□□ 0.72
LTN1O94822 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.52■□□□□ 0.72
LTN1O94822 AC124068.2-201ENST00000569473 1109 ntBASIC19.52■□□□□ 0.72
LTN1O94822 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC19.52■□□□□ 0.72
LTN1O94822 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
LTN1O94822 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LTN1O94822 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LTN1O94822 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LTN1O94822 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LTN1O94822 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LTN1O94822 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
LTN1O94822 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LTN1O94822 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.52■□□□□ 0.72
LTN1O94822 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LTN1O94822 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LTN1O94822 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LTN1O94822 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
LTN1O94822 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
LTN1O94822 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LTN1O94822 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LTN1O94822 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC19.52■□□□□ 0.71
LTN1O94822 AC073869.2-201ENST00000417338 1026 ntBASIC19.52■□□□□ 0.71
LTN1O94822 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC19.52■□□□□ 0.71
LTN1O94822 AC130709.1-201ENST00000484779 1212 ntBASIC19.52■□□□□ 0.71
LTN1O94822 RHEB-207ENST00000496004 744 ntTSL 2 BASIC19.52■□□□□ 0.71
LTN1O94822 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC19.52■□□□□ 0.71
LTN1O94822 HLA-C-210ENST00000640219 976 ntBASIC19.52■□□□□ 0.71
LTN1O94822 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LTN1O94822 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LTN1O94822 AC138035.3-201ENST00000622706 2791 ntBASIC19.51■□□□□ 0.71
LTN1O94822 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTN1O94822 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.51■□□□□ 0.71
LTN1O94822 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTN1O94822 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC19.51■□□□□ 0.71
LTN1O94822 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC19.51■□□□□ 0.71
LTN1O94822 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.51■□□□□ 0.71
LTN1O94822 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.51■□□□□ 0.71
LTN1O94822 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.51■□□□□ 0.71
LTN1O94822 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTN1O94822 AL109954.1-202ENST00000564051 2148 ntBASIC19.51■□□□□ 0.71
LTN1O94822 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTN1O94822 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTN1O94822 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.51■□□□□ 0.71
LTN1O94822 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC19.51■□□□□ 0.71
LTN1O94822 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC19.51■□□□□ 0.71
LTN1O94822 AC026410.1-201ENST00000507366 1101 ntBASIC19.51■□□□□ 0.71
LTN1O94822 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC19.51■□□□□ 0.71
LTN1O94822 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.51■□□□□ 0.71
LTN1O94822 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC19.51■□□□□ 0.71
LTN1O94822 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.51■□□□□ 0.71
LTN1O94822 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
LTN1O94822 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC19.51■□□□□ 0.71
LTN1O94822 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC19.51■□□□□ 0.71
LTN1O94822 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC19.51■□□□□ 0.71
LTN1O94822 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTN1O94822 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC19.51■□□□□ 0.71
LTN1O94822 IL9RP3-201ENST00000442856 1674 ntBASIC19.51■□□□□ 0.71
LTN1O94822 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.51■□□□□ 0.71
LTN1O94822 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LTN1O94822 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTN1O94822 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTN1O94822 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.51■□□□□ 0.71
LTN1O94822 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTN1O94822 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTN1O94822 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.51■□□□□ 0.71
LTN1O94822 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.51■□□□□ 0.71
LTN1O94822 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LTN1O94822 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LTN1O94822 AC006504.5-208ENST00000588784 2401 ntBASIC19.5■□□□□ 0.71
LTN1O94822 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.5■□□□□ 0.71
LTN1O94822 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC19.5■□□□□ 0.71
LTN1O94822 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.5■□□□□ 0.71
LTN1O94822 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LTN1O94822 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.5■□□□□ 0.71
LTN1O94822 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LTN1O94822 LINC00528-201ENST00000600723 2160 ntBASIC19.5■□□□□ 0.71
LTN1O94822 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms