Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
UPK1BO75841 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.21□□□□□ -0.3
UPK1BO75841 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UPK1BO75841 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UPK1BO75841 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.21□□□□□ -0.3
UPK1BO75841 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.21□□□□□ -0.3
UPK1BO75841 DLX4-206ENST00000611342 1662 ntBASIC13.21□□□□□ -0.3
UPK1BO75841 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UPK1BO75841 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UPK1BO75841 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.21□□□□□ -0.3
UPK1BO75841 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UPK1BO75841 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
UPK1BO75841 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.21□□□□□ -0.3
UPK1BO75841 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.21□□□□□ -0.3
UPK1BO75841 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
UPK1BO75841 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 AC018665.1-201ENST00000622927 1362 ntBASIC13.2□□□□□ -0.3
UPK1BO75841 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
UPK1BO75841 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 PEG13-201ENST00000631594 5667 ntBASIC13.2□□□□□ -0.3
UPK1BO75841 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
UPK1BO75841 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 NCLP1-201ENST00000445357 1963 ntBASIC13.2□□□□□ -0.3
UPK1BO75841 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
UPK1BO75841 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 PRORSD1P-201ENST00000295112 541 ntBASIC13.2□□□□□ -0.3
UPK1BO75841 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.2□□□□□ -0.3
UPK1BO75841 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
UPK1BO75841 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
UPK1BO75841 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK1BO75841 CHCHD2P8-201ENST00000429873 447 ntBASIC13.2□□□□□ -0.3
UPK1BO75841 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
UPK1BO75841 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.2□□□□□ -0.3
UPK1BO75841 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.2□□□□□ -0.3
UPK1BO75841 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
UPK1BO75841 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK1BO75841 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK1BO75841 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.2□□□□□ -0.3
UPK1BO75841 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK1BO75841 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 LILRP1-201ENST00000444199 1370 ntBASIC13.2□□□□□ -0.3
UPK1BO75841 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK1BO75841 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK1BO75841 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK1BO75841 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK1BO75841 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK1BO75841 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK1BO75841 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms