Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 AC007969.1-201ENST00000433675 447 ntBASIC15.31■□□□□ 0.04
PRAMEF11O60813 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 AC022210.1-201ENST00000449856 793 ntBASIC15.31■□□□□ 0.04
PRAMEF11O60813 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 AC138696.2-201ENST00000607376 223 ntBASIC15.31■□□□□ 0.04
PRAMEF11O60813 MIR6775-201ENST00000617557 69 ntBASIC15.31■□□□□ 0.04
PRAMEF11O60813 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 AL138725.1-201ENST00000407347 1314 ntBASIC15.31■□□□□ 0.04
PRAMEF11O60813 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 AC003102.2-201ENST00000589195 1469 ntBASIC15.31■□□□□ 0.04
PRAMEF11O60813 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF11O60813 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF11O60813 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 RN7SKP230-201ENST00000365642 335 ntBASIC15.3■□□□□ 0.04
PRAMEF11O60813 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 FKBP4P6-201ENST00000457486 1332 ntBASIC15.3■□□□□ 0.04
PRAMEF11O60813 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 IGHV3-71-201ENST00000523324 359 ntBASIC15.3■□□□□ 0.04
PRAMEF11O60813 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 AC106820.3-201ENST00000561653 397 ntBASIC15.3■□□□□ 0.04
PRAMEF11O60813 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 AC017083.2-201ENST00000608069 979 ntBASIC15.3■□□□□ 0.04
PRAMEF11O60813 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF11O60813 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF11O60813 CICP23-201ENST00000605013 2741 ntBASIC15.3■□□□□ 0.04
PRAMEF11O60813 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.29■□□□□ 0.04
PRAMEF11O60813 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 FAM8A4P-201ENST00000435433 1213 ntBASIC15.29■□□□□ 0.04
PRAMEF11O60813 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 AC119751.2-201ENST00000504529 210 ntBASIC15.29■□□□□ 0.04
PRAMEF11O60813 AL391280.1-201ENST00000506969 1062 ntBASIC15.29■□□□□ 0.04
PRAMEF11O60813 AC079316.1-201ENST00000548397 411 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms