Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.42□□□□□ -0.42
SSSCA1O60232 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.42□□□□□ -0.42
SSSCA1O60232 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.42□□□□□ -0.42
SSSCA1O60232 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
SSSCA1O60232 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.42□□□□□ -0.42
SSSCA1O60232 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 TPT1P11-201ENST00000458482 498 ntBASIC12.42□□□□□ -0.42
SSSCA1O60232 AC093909.1-201ENST00000504731 1122 ntBASIC12.42□□□□□ -0.42
SSSCA1O60232 AC079776.4-201ENST00000511039 504 ntBASIC12.42□□□□□ -0.42
SSSCA1O60232 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.42□□□□□ -0.42
SSSCA1O60232 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.42□□□□□ -0.42
SSSCA1O60232 PDPK2P-202ENST00000562415 1191 ntBASIC12.42□□□□□ -0.42
SSSCA1O60232 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.42□□□□□ -0.42
SSSCA1O60232 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.42□□□□□ -0.42
SSSCA1O60232 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.42□□□□□ -0.42
SSSCA1O60232 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 AC064836.3-201ENST00000607928 673 ntBASIC12.42□□□□□ -0.42
SSSCA1O60232 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.42□□□□□ -0.42
SSSCA1O60232 AC023090.2-201ENST00000625182 2110 ntBASIC12.42□□□□□ -0.42
SSSCA1O60232 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SSSCA1O60232 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.42□□□□□ -0.42
SSSCA1O60232 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SSSCA1O60232 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.42□□□□□ -0.42
SSSCA1O60232 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSSCA1O60232 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.41□□□□□ -0.42
SSSCA1O60232 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SSSCA1O60232 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.41□□□□□ -0.42
SSSCA1O60232 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.41□□□□□ -0.42
SSSCA1O60232 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.41□□□□□ -0.42
SSSCA1O60232 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SSSCA1O60232 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 TFAMP1-201ENST00000412727 736 ntBASIC12.41□□□□□ -0.42
SSSCA1O60232 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.41□□□□□ -0.42
SSSCA1O60232 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.41□□□□□ -0.42
SSSCA1O60232 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms