Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 MIR4469-201ENST00000583919 79 ntBASIC14.89□□□□□ -0.03
ITM2AO43736 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.89□□□□□ -0.03
ITM2AO43736 AC009093.7-201ENST00000623853 1223 ntBASIC14.89□□□□□ -0.03
ITM2AO43736 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.89□□□□□ -0.03
ITM2AO43736 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ITM2AO43736 ST20-AS1-201ENST00000560255 4223 ntBASIC14.89□□□□□ -0.03
ITM2AO43736 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
ITM2AO43736 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
ITM2AO43736 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ITM2AO43736 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.89□□□□□ -0.03
ITM2AO43736 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.89□□□□□ -0.03
ITM2AO43736 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.89□□□□□ -0.03
ITM2AO43736 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ITM2AO43736 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
ITM2AO43736 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
ITM2AO43736 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ITM2AO43736 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.88□□□□□ -0.03
ITM2AO43736 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.88□□□□□ -0.03
ITM2AO43736 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.88□□□□□ -0.03
ITM2AO43736 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.88□□□□□ -0.03
ITM2AO43736 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.88□□□□□ -0.03
ITM2AO43736 SERBP1P3-201ENST00000459980 809 ntBASIC14.88□□□□□ -0.03
ITM2AO43736 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.88□□□□□ -0.03
ITM2AO43736 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
ITM2AO43736 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.88□□□□□ -0.03
ITM2AO43736 KRT18P58-201ENST00000527480 1120 ntBASIC14.88□□□□□ -0.03
ITM2AO43736 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.88□□□□□ -0.03
ITM2AO43736 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.88□□□□□ -0.03
ITM2AO43736 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.88□□□□□ -0.03
ITM2AO43736 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 AC012617.1-204ENST00000586340 2305 ntBASIC14.88□□□□□ -0.03
ITM2AO43736 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
ITM2AO43736 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ITM2AO43736 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.88□□□□□ -0.03
ITM2AO43736 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ITM2AO43736 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.87□□□□□ -0.03
ITM2AO43736 AC016397.2-201ENST00000624848 1985 ntBASIC14.87□□□□□ -0.03
ITM2AO43736 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ITM2AO43736 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ITM2AO43736 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ITM2AO43736 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ITM2AO43736 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.87□□□□□ -0.03
ITM2AO43736 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ITM2AO43736 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ITM2AO43736 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.87□□□□□ -0.03
ITM2AO43736 AL122018.1-201ENST00000446607 2310 ntBASIC14.87□□□□□ -0.03
ITM2AO43736 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.87□□□□□ -0.03
ITM2AO43736 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ITM2AO43736 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ITM2AO43736 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.87□□□□□ -0.03
ITM2AO43736 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
ITM2AO43736 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ITM2AO43736 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ITM2AO43736 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.87□□□□□ -0.03
ITM2AO43736 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms