Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM38O00635 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM38O00635 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM38O00635 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM38O00635 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM38O00635 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM38O00635 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM38O00635 AC093433.1-201ENST00000458048 571 ntBASIC15.32■□□□□ 0.04
TRIM38O00635 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM38O00635 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 AC009486.1-201ENST00000569860 813 ntBASIC15.32■□□□□ 0.04
TRIM38O00635 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM38O00635 AC005252.2-201ENST00000624630 1141 ntBASIC15.32■□□□□ 0.04
TRIM38O00635 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM38O00635 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 TUBB1P2-201ENST00000422712 1306 ntBASIC15.32■□□□□ 0.04
TRIM38O00635 TUBB1P1-201ENST00000503144 1300 ntBASIC15.32■□□□□ 0.04
TRIM38O00635 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM38O00635 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 MYO15B-237ENST00000642007 4893 ntBASIC15.32■□□□□ 0.04
TRIM38O00635 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM38O00635 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM38O00635 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM38O00635 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM38O00635 AL355994.2-201ENST00000447882 704 ntBASIC15.31■□□□□ 0.04
TRIM38O00635 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM38O00635 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM38O00635 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM38O00635 FTH1P14-201ENST00000482930 551 ntBASIC15.31■□□□□ 0.04
TRIM38O00635 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.31■□□□□ 0.04
TRIM38O00635 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRIM38O00635 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM38O00635 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.31■□□□□ 0.04
TRIM38O00635 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM38O00635 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM38O00635 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 AC097359.3-201ENST00000603982 1210 ntBASIC15.31■□□□□ 0.04
TRIM38O00635 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM38O00635 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM38O00635 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 AC134312.5-201ENST00000568031 1313 ntBASIC15.31■□□□□ 0.04
TRIM38O00635 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM38O00635 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 AC126365.1-201ENST00000578585 1514 ntBASIC15.31■□□□□ 0.04
TRIM38O00635 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 AL607033.1-201ENST00000623900 1599 ntBASIC15.31■□□□□ 0.04
TRIM38O00635 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 OR2I1P-209ENST00000641730 5365 ntBASIC15.31■□□□□ 0.04
TRIM38O00635 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM38O00635 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM38O00635 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM38O00635 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM38O00635 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM38O00635 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms