Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
AP3B1O00203 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.35■□□□□ 0.05
AP3B1O00203 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP3B1O00203 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.35■□□□□ 0.05
AP3B1O00203 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP3B1O00203 AC140479.7-201ENST00000636301 2332 ntBASIC15.35■□□□□ 0.05
AP3B1O00203 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP3B1O00203 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.35■□□□□ 0.05
AP3B1O00203 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AP3B1O00203 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.35■□□□□ 0.05
AP3B1O00203 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.35■□□□□ 0.05
AP3B1O00203 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.35■□□□□ 0.05
AP3B1O00203 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AP3B1O00203 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP3B1O00203 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.35■□□□□ 0.05
AP3B1O00203 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.35■□□□□ 0.05
AP3B1O00203 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP3B1O00203 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP3B1O00203 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP3B1O00203 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AP3B1O00203 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.34■□□□□ 0.05
AP3B1O00203 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AP3B1O00203 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.34■□□□□ 0.05
AP3B1O00203 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.34■□□□□ 0.05
AP3B1O00203 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.34■□□□□ 0.05
AP3B1O00203 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.34■□□□□ 0.05
AP3B1O00203 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 AL139094.1-201ENST00000405549 1188 ntBASIC15.34■□□□□ 0.05
AP3B1O00203 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.34■□□□□ 0.05
AP3B1O00203 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.34■□□□□ 0.05
AP3B1O00203 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.34■□□□□ 0.05
AP3B1O00203 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.34■□□□□ 0.05
AP3B1O00203 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.34■□□□□ 0.05
AP3B1O00203 RFPL4AP1-201ENST00000530883 850 ntBASIC15.34■□□□□ 0.05
AP3B1O00203 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.34■□□□□ 0.05
AP3B1O00203 AC120045.2-201ENST00000567334 178 ntBASIC15.34■□□□□ 0.05
AP3B1O00203 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.34■□□□□ 0.05
AP3B1O00203 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.34■□□□□ 0.05
AP3B1O00203 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.34■□□□□ 0.05
AP3B1O00203 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.34■□□□□ 0.05
AP3B1O00203 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.34■□□□□ 0.05
AP3B1O00203 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 AC093726.1-201ENST00000608064 963 ntBASIC15.34■□□□□ 0.05
AP3B1O00203 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.34■□□□□ 0.05
AP3B1O00203 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.34■□□□□ 0.05
AP3B1O00203 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.34■□□□□ 0.05
AP3B1O00203 AC113367.3-201ENST00000508316 1912 ntBASIC15.34■□□□□ 0.05
AP3B1O00203 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.34■□□□□ 0.05
AP3B1O00203 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 AC138969.2-201ENST00000532739 9932 ntBASIC15.34■□□□□ 0.05
AP3B1O00203 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.34■□□□□ 0.05
AP3B1O00203 SLC7A15P-201ENST00000424028 1363 ntBASIC15.34■□□□□ 0.05
AP3B1O00203 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP3B1O00203 KRT8P14-201ENST00000414254 1442 ntBASIC15.34■□□□□ 0.05
AP3B1O00203 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP3B1O00203 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
AP3B1O00203 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
AP3B1O00203 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
AP3B1O00203 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
AP3B1O00203 AL137783.1-201ENST00000623494 1896 ntBASIC15.33■□□□□ 0.05
AP3B1O00203 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.33■□□□□ 0.05
AP3B1O00203 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP3B1O00203 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
AP3B1O00203 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP3B1O00203 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP3B1O00203 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
AP3B1O00203 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.33■□□□□ 0.05
AP3B1O00203 AL157414.3-201ENST00000624276 1954 ntBASIC15.33■□□□□ 0.05
AP3B1O00203 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP3B1O00203 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
AP3B1O00203 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.33■□□□□ 0.04
AP3B1O00203 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3B1O00203 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3B1O00203 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP3B1O00203 DFFBP1-201ENST00000433250 979 ntBASIC15.33■□□□□ 0.04
AP3B1O00203 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.33■□□□□ 0.04
AP3B1O00203 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.33■□□□□ 0.04
AP3B1O00203 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP3B1O00203 AC022616.1-201ENST00000518688 554 ntBASIC15.33■□□□□ 0.04
AP3B1O00203 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.33■□□□□ 0.04
AP3B1O00203 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP3B1O00203 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms