Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 POM121L10P-201ENST00000436994 1285 ntBASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 CHMP1AP1-201ENST00000445563 662 ntBASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 KRT8P13-201ENST00000463294 1010 ntBASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AL133338.1-201ENST00000565695 1517 ntBASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 RN7SKP175-201ENST00000408472 289 ntBASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 GPAA1P2-201ENST00000417923 928 ntBASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AC138696.2-201ENST00000607376 223 ntBASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AP001002.3-201ENST00000623482 206 ntBASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AC002472.3-201ENST00000640124 621 ntBASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 AC008741.2-201ENST00000612792 3115 ntBASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms