Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 AC063926.3-201ENST00000624734 5658 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 CNN2P11-201ENST00000429351 262 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 AC092580.3-201ENST00000430932 139 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 AC092865.5-201ENST00000545435 363 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 AC092337.1-201ENST00000568699 1129 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 MIR3687-2-201ENST00000577708 61 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 GPALPP1-207ENST00000611650 899 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 MIR3687-1-201ENST00000614492 61 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 AC073592.8-201ENST00000624126 511 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 Z92544.3-201ENST00000624747 417 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RCCD1A6NED2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.11■□□□□ 0.17
RCCD1A6NED2 CICP17-201ENST00000418553 2377 ntBASIC16.11■□□□□ 0.17
RCCD1A6NED2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 AC090505.1-201ENST00000430515 1834 ntBASIC16.1■□□□□ 0.17
RCCD1A6NED2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 AL137784.3-201ENST00000623858 2288 ntBASIC16.1■□□□□ 0.17
RCCD1A6NED2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 AC254562.1-201ENST00000417586 456 ntBASIC16.1■□□□□ 0.17
RCCD1A6NED2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 BX842568.4-201ENST00000421222 227 ntBASIC16.1■□□□□ 0.17
RCCD1A6NED2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 AL353779.1-201ENST00000434793 351 ntBASIC16.1■□□□□ 0.17
RCCD1A6NED2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 AC087499.5-201ENST00000452760 1342 ntBASIC16.1■□□□□ 0.17
RCCD1A6NED2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms