Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 KRT18P9-201ENST00000604826 1300 ntBASIC18.62■□□□□ 0.57
LAMB4A4D0S4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 IQSEC3P1-201ENST00000538799 536 ntBASIC18.62■□□□□ 0.57
LAMB4A4D0S4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 AC124068.2-201ENST00000569473 1109 ntBASIC18.62■□□□□ 0.57
LAMB4A4D0S4 RN7SL555P-201ENST00000584742 339 ntBASIC18.62■□□□□ 0.57
LAMB4A4D0S4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 AJ011931.1-201ENST00000618749 2492 ntBASIC18.62■□□□□ 0.57
LAMB4A4D0S4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMB4A4D0S4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 FAM90A2P-201ENST00000511144 1395 ntBASIC18.61■□□□□ 0.57
LAMB4A4D0S4 FAM90A25P-201ENST00000528404 1395 ntBASIC18.61■□□□□ 0.57
LAMB4A4D0S4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 AC006504.5-208ENST00000588784 2401 ntBASIC18.61■□□□□ 0.57
LAMB4A4D0S4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LAMB4A4D0S4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 ORAOV1P1-201ENST00000503108 395 ntBASIC18.6■□□□□ 0.57
LAMB4A4D0S4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 AC005632.3-201ENST00000605544 308 ntBASIC18.6■□□□□ 0.57
LAMB4A4D0S4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 AC015688.4-201ENST00000580780 1647 ntBASIC18.6■□□□□ 0.57
LAMB4A4D0S4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 AC008267.1-201ENST00000474858 1069 ntBASIC18.6■□□□□ 0.57
LAMB4A4D0S4 RN7SL81P-201ENST00000493781 261 ntBASIC18.6■□□□□ 0.57
LAMB4A4D0S4 AC022447.6-201ENST00000515522 438 ntBASIC18.6■□□□□ 0.57
LAMB4A4D0S4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMB4A4D0S4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms