Protein–RNA interactions for Protein: Q9Y3S2

ZNF330, Zinc finger protein 330, humanhuman

Predicted RBP Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF330Q9Y3S2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 ACTG1P2-201ENST00000415776 1125 ntBASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 ACTG1P11-201ENST00000425411 1125 ntBASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 RN7SL769P-201ENST00000469386 295 ntBASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 MESTP3-201ENST00000503460 968 ntBASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 AC106794.1-201ENST00000506935 792 ntBASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 AC022217.1-201ENST00000521069 738 ntBASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 DUX4L47-201ENST00000566374 394 ntBASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 AL360270.3-201ENST00000609118 1348 ntBASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 AC008894.3-201ENST00000624324 3103 ntBASIC19.23■□□□□ 0.67
ZNF330Q9Y3S2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 AC104073.2-201ENST00000453737 312 ntBASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 RN7SL720P-201ENST00000488178 304 ntBASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 RN7SL774P-201ENST00000577467 290 ntBASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 AC022748.3-201ENST00000621828 275 ntBASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 AL603764.1-201ENST00000636452 321 ntBASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 TUBBP5-203ENST00000508529 1334 ntBASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF330Q9Y3S2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 AP005117.1-202ENST00000581724 1908 ntBASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF330Q9Y3S2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms