Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 MIR3147-201ENST00000577811 66 ntBASIC18.97■□□□□ 0.63
SCN11AQ9UI33 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 AC025262.2-201ENST00000623975 1056 ntBASIC18.97■□□□□ 0.63
SCN11AQ9UI33 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCN11AQ9UI33 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 AL512430.1-201ENST00000392575 860 ntBASIC18.96■□□□□ 0.63
SCN11AQ9UI33 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 AC006504.5-208ENST00000588784 2401 ntBASIC18.96■□□□□ 0.63
SCN11AQ9UI33 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 AC074138.1-201ENST00000611182 1303 ntBASIC18.96■□□□□ 0.63
SCN11AQ9UI33 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 RN7SL8P-201ENST00000461771 266 ntBASIC18.96■□□□□ 0.63
SCN11AQ9UI33 IGHV3-37-201ENST00000518544 340 ntBASIC18.96■□□□□ 0.63
SCN11AQ9UI33 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.96■□□□□ 0.63
SCN11AQ9UI33 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 AC022532.1-201ENST00000624563 1728 ntBASIC18.95■□□□□ 0.62
SCN11AQ9UI33 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 AC124068.2-201ENST00000569473 1109 ntBASIC18.95■□□□□ 0.62
SCN11AQ9UI33 AC092171.5-201ENST00000608012 942 ntBASIC18.95■□□□□ 0.62
SCN11AQ9UI33 AC084781.1-201ENST00000613737 656 ntBASIC18.95■□□□□ 0.62
SCN11AQ9UI33 MIR7845-201ENST00000618396 99 ntBASIC18.95■□□□□ 0.62
SCN11AQ9UI33 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN11AQ9UI33 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms