Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MKKSQ9NPJ1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 CICP11-201ENST00000434745 2827 ntBASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 ANKRD19P-201ENST00000338192 862 ntBASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AC119751.2-201ENST00000504529 210 ntBASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AC022616.1-201ENST00000518688 554 ntBASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 RN7SL48P-201ENST00000579283 293 ntBASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AC244669.2-201ENST00000612320 853 ntBASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 RHOXF1P1-202ENST00000635473 501 ntBASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AL138709.1-201ENST00000614840 1693 ntBASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 SBF1P1-201ENST00000444527 5631 ntBASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 AC012508.2-201ENST00000567613 1472 ntBASIC14.38□□□□□ -0.11
MKKSQ9NPJ1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 C18orf15-201ENST00000623680 2534 ntBASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 CNN2P8-201ENST00000421872 913 ntBASIC14.37□□□□□ -0.11
MKKSQ9NPJ1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms