Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VTA1Q9NP79 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VTA1Q9NP79 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTA1Q9NP79 AC009884.2-201ENST00000603110 324 ntBASIC16.8■□□□□ 0.28
VTA1Q9NP79 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.8■□□□□ 0.28
VTA1Q9NP79 BX088702.1-201ENST00000610784 235 ntBASIC16.8■□□□□ 0.28
VTA1Q9NP79 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.8■□□□□ 0.28
VTA1Q9NP79 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.8■□□□□ 0.28
VTA1Q9NP79 DOC2GP-204ENST00000639052 2548 ntBASIC16.8■□□□□ 0.28
VTA1Q9NP79 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTA1Q9NP79 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VTA1Q9NP79 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.8■□□□□ 0.28
VTA1Q9NP79 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.8■□□□□ 0.28
VTA1Q9NP79 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
VTA1Q9NP79 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTA1Q9NP79 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTA1Q9NP79 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.8■□□□□ 0.28
VTA1Q9NP79 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTA1Q9NP79 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTA1Q9NP79 AC126365.1-201ENST00000578585 1514 ntBASIC16.8■□□□□ 0.28
VTA1Q9NP79 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.8■□□□□ 0.28
VTA1Q9NP79 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.79■□□□□ 0.28
VTA1Q9NP79 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 RCC2P8-201ENST00000502779 1035 ntBASIC16.79■□□□□ 0.28
VTA1Q9NP79 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.79■□□□□ 0.28
VTA1Q9NP79 AC128714.1-201ENST00000637035 887 ntBASIC16.79■□□□□ 0.28
VTA1Q9NP79 NAP1L6-202ENST00000641404 1222 ntBASIC16.79■□□□□ 0.28
VTA1Q9NP79 Z98259.2-201ENST00000641583 609 ntBASIC16.79■□□□□ 0.28
VTA1Q9NP79 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 MROH4P-201ENST00000431302 1578 ntBASIC16.79■□□□□ 0.28
VTA1Q9NP79 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTA1Q9NP79 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VTA1Q9NP79 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 AC023090.2-201ENST00000625182 2110 ntBASIC16.78■□□□□ 0.28
VTA1Q9NP79 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 AC091046.1-201ENST00000331871 207 ntBASIC16.78■□□□□ 0.28
VTA1Q9NP79 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 ISCA2P1-201ENST00000425548 448 ntBASIC16.78■□□□□ 0.28
VTA1Q9NP79 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 AL353637.1-201ENST00000451571 732 ntBASIC16.78■□□□□ 0.28
VTA1Q9NP79 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 MIR6720-201ENST00000611664 98 ntBASIC16.78■□□□□ 0.28
VTA1Q9NP79 AF254983.2-201ENST00000612331 135 ntBASIC16.78■□□□□ 0.28
VTA1Q9NP79 AL353770.1-201ENST00000614915 403 ntBASIC16.78■□□□□ 0.28
VTA1Q9NP79 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 SALL4P5-201ENST00000419001 1760 ntBASIC16.78■□□□□ 0.28
VTA1Q9NP79 AC112693.3-201ENST00000624819 1983 ntBASIC16.78■□□□□ 0.28
VTA1Q9NP79 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 MBLAC2-202ENST00000514906 1936 ntBASIC16.78■□□□□ 0.28
VTA1Q9NP79 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTA1Q9NP79 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.78■□□□□ 0.28
VTA1Q9NP79 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms