Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 AC098934.1-203ENST00000442868 1262 ntBASIC13.7□□□□□ -0.22
CHD8Q9HCK8 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 PRMT1P1-201ENST00000604252 1009 ntBASIC13.7□□□□□ -0.22
CHD8Q9HCK8 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 AC002511.3-201ENST00000638098 420 ntBASIC13.7□□□□□ -0.22
CHD8Q9HCK8 AC139713.2-207ENST00000641556 1292 ntBASIC13.7□□□□□ -0.22
CHD8Q9HCK8 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 FUCA1P1-201ENST00000374476 1351 ntBASIC13.7□□□□□ -0.22
CHD8Q9HCK8 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 ISL1-203ENST00000511384 981 ntTSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 Z82244.2-201ENST00000632196 448 ntBASIC13.7□□□□□ -0.22
CHD8Q9HCK8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.7□□□□□ -0.22
CHD8Q9HCK8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 ME2P1-201ENST00000426028 1970 ntBASIC13.69□□□□□ -0.22
CHD8Q9HCK8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 AHCYP4-201ENST00000419201 1315 ntBASIC13.69□□□□□ -0.22
CHD8Q9HCK8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 SAP18P2-201ENST00000434334 459 ntBASIC13.69□□□□□ -0.22
CHD8Q9HCK8 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 ALG1L15P-201ENST00000482834 794 ntBASIC13.69□□□□□ -0.22
CHD8Q9HCK8 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 AP001094.4-201ENST00000579008 2176 ntBASIC13.69□□□□□ -0.22
CHD8Q9HCK8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 AC018638.5-201ENST00000450885 754 ntBASIC13.69□□□□□ -0.22
CHD8Q9HCK8 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms