Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC097376.2-205ENST00000610159 5334 ntBASIC16.96■□□□□ 0.31
CBX8Q9HC52 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX8Q9HC52 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX8Q9HC52 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 TOMM22P5-201ENST00000416399 439 ntBASIC16.96■□□□□ 0.31
CBX8Q9HC52 KRT18P32-201ENST00000424695 1287 ntBASIC16.96■□□□□ 0.31
CBX8Q9HC52 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 SPDYE14P-201ENST00000442619 822 ntBASIC16.96■□□□□ 0.31
CBX8Q9HC52 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 AC093520.2-201ENST00000561830 333 ntBASIC16.96■□□□□ 0.31
CBX8Q9HC52 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX8Q9HC52 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBX8Q9HC52 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CBX8Q9HC52 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.96■□□□□ 0.3
CBX8Q9HC52 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CBX8Q9HC52 AC090505.1-201ENST00000430515 1834 ntBASIC16.96■□□□□ 0.3
CBX8Q9HC52 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CBX8Q9HC52 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CBX8Q9HC52 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CBX8Q9HC52 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 AL080243.2-201ENST00000418783 582 ntBASIC16.95■□□□□ 0.3
CBX8Q9HC52 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 ALG1L5P-201ENST00000482043 771 ntBASIC16.95■□□□□ 0.3
CBX8Q9HC52 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 CICP20-201ENST00000443330 2801 ntBASIC16.95■□□□□ 0.3
CBX8Q9HC52 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX8Q9HC52 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CBX8Q9HC52 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 HTR5BP-201ENST00000430851 1154 ntBASIC16.94■□□□□ 0.3
CBX8Q9HC52 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 AL033527.5-202ENST00000641632 1098 ntBASIC16.94■□□□□ 0.3
CBX8Q9HC52 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 CICP8-201ENST00000455800 2813 ntBASIC16.94■□□□□ 0.3
CBX8Q9HC52 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX8Q9HC52 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CBX8Q9HC52 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms