Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 AC009078.2-202ENST00000463353 338 ntBASIC18.7■□□□□ 0.58
UPF2Q9HAU5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 AC140113.2-201ENST00000604370 208 ntBASIC18.7■□□□□ 0.58
UPF2Q9HAU5 AC025181.2-201ENST00000606994 802 ntBASIC18.7■□□□□ 0.58
UPF2Q9HAU5 AC018529.1-201ENST00000613063 361 ntBASIC18.7■□□□□ 0.58
UPF2Q9HAU5 RET-205ENST00000615310 4337 ntTSL 5 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 AC104457.1-201ENST00000401024 814 ntBASIC18.69■□□□□ 0.58
UPF2Q9HAU5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 IL9RP2-201ENST00000423948 1312 ntBASIC18.69■□□□□ 0.58
UPF2Q9HAU5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPF2Q9HAU5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 KRT8P12-202ENST00000472924 1397 ntBASIC18.68■□□□□ 0.58
UPF2Q9HAU5 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 AC055811.4-201ENST00000624039 1754 ntBASIC18.68■□□□□ 0.58
UPF2Q9HAU5 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 YBX2P1-201ENST00000394192 760 ntBASIC18.68■□□□□ 0.58
UPF2Q9HAU5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 BANF1P1-201ENST00000553684 263 ntBASIC18.68■□□□□ 0.58
UPF2Q9HAU5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UPF2Q9HAU5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms