Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.61■□□□□ 0.41
SH2D4AQ9H788 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 AC023824.1-201ENST00000562945 2975 ntBASIC17.61■□□□□ 0.41
SH2D4AQ9H788 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.61■□□□□ 0.41
SH2D4AQ9H788 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 AC004466.1-201ENST00000599515 1080 ntBASIC17.61■□□□□ 0.41
SH2D4AQ9H788 AC007663.3-201ENST00000609632 465 ntBASIC17.61■□□□□ 0.41
SH2D4AQ9H788 AP001002.3-201ENST00000623482 206 ntBASIC17.61■□□□□ 0.41
SH2D4AQ9H788 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SH2D4AQ9H788 AL137783.1-201ENST00000623494 1896 ntBASIC17.61■□□□□ 0.41
SH2D4AQ9H788 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 AC004945.1-201ENST00000416738 983 ntBASIC17.6■□□□□ 0.41
SH2D4AQ9H788 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.6■□□□□ 0.41
SH2D4AQ9H788 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 AKR7A2P1-201ENST00000460134 915 ntBASIC17.6■□□□□ 0.41
SH2D4AQ9H788 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SH2D4AQ9H788 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D4AQ9H788 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms