Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PACSIN1Q9BY11 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PACSIN1Q9BY11 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 AC018665.1-201ENST00000622927 1362 ntBASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 AC152010.1-201ENST00000415779 2006 ntBASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 FLJ16779-201ENST00000612722 7638 ntBASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 AL353779.1-201ENST00000434793 351 ntBASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 AC067863.1-201ENST00000494933 530 ntBASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 AL390754.1-201ENST00000619088 582 ntBASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.14■□□□□ 0.17
PACSIN1Q9BY11 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 AC135586.1-201ENST00000539323 574 ntBASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 AL662799.1-202ENST00000614205 422 ntBASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.13■□□□□ 0.17
PACSIN1Q9BY11 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.12■□□□□ 0.17
PACSIN1Q9BY11 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.12■□□□□ 0.17
PACSIN1Q9BY11 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACSIN1Q9BY11 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACSIN1Q9BY11 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms