Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 RPSAP43-201ENST00000402237 625 ntBASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 TOMM22P5-201ENST00000416399 439 ntBASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 RN7SL618P-201ENST00000477850 296 ntBASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 SAMD11P1-201ENST00000571429 661 ntBASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 AL138828.2-201ENST00000615812 383 ntBASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 AC067750.1-201ENST00000608826 6545 ntBASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 AC010327.5-201ENST00000586923 3061 ntBASIC12.85□□□□□ -0.35
HDHD3Q9BSH5 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms