Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 AC009090.5-201ENST00000624886 2285 ntBASIC13.74□□□□□ -0.21
USB1Q9BQ65 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 GK-202ENST00000378941 458 ntTSL 3 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 AC074338.1-201ENST00000416825 156 ntBASIC13.74□□□□□ -0.21
USB1Q9BQ65 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 SRPK2P-201ENST00000523408 1100 ntBASIC13.74□□□□□ -0.21
USB1Q9BQ65 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 BRI3BPP1-201ENST00000594224 787 ntBASIC13.74□□□□□ -0.21
USB1Q9BQ65 AC004790.1-201ENST00000612686 536 ntBASIC13.74□□□□□ -0.21
USB1Q9BQ65 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.74□□□□□ -0.21
USB1Q9BQ65 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
USB1Q9BQ65 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 AC134915.1-201ENST00000426461 574 ntBASIC13.73□□□□□ -0.21
USB1Q9BQ65 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 AC017099.1-201ENST00000448261 1028 ntBASIC13.73□□□□□ -0.21
USB1Q9BQ65 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 AC092451.2-201ENST00000538746 658 ntBASIC13.73□□□□□ -0.21
USB1Q9BQ65 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms