Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AC103702.1-201ENST00000548801 2630 ntBASIC12.59□□□□□ -0.39
GAFA1Q96PS6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 LINC01101-201ENST00000622953 1884 ntBASIC12.59□□□□□ -0.39
GAFA1Q96PS6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AC025279.2-201ENST00000569730 653 ntBASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AC004466.1-201ENST00000599515 1080 ntBASIC12.59□□□□□ -0.39
GAFA1Q96PS6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.59□□□□□ -0.39
GAFA1Q96PS6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
GAFA1Q96PS6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GAFA1Q96PS6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GAFA1Q96PS6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GAFA1Q96PS6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
GAFA1Q96PS6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GAFA1Q96PS6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.58□□□□□ -0.4
GAFA1Q96PS6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 C2orf27AP3-201ENST00000434123 579 ntBASIC12.58□□□□□ -0.4
GAFA1Q96PS6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 AC245100.3-201ENST00000441281 285 ntBASIC12.58□□□□□ -0.4
GAFA1Q96PS6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 FO681548.1-201ENST00000455617 1132 ntBASIC12.58□□□□□ -0.4
GAFA1Q96PS6 FTH1P14-201ENST00000482930 551 ntBASIC12.58□□□□□ -0.4
GAFA1Q96PS6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms