Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.69■□□□□ 0.1
C9orf72Q96LT7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 SLED1-202ENST00000512051 380 ntBASIC15.69■□□□□ 0.1
C9orf72Q96LT7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 AC012508.2-201ENST00000567613 1472 ntBASIC15.69■□□□□ 0.1
C9orf72Q96LT7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 AC022144.1-201ENST00000602255 1580 ntBASIC15.68■□□□□ 0.1
C9orf72Q96LT7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 MRPS18AP1-201ENST00000414458 589 ntBASIC15.68■□□□□ 0.1
C9orf72Q96LT7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 AC190387.1-201ENST00000551683 408 ntBASIC15.68■□□□□ 0.1
C9orf72Q96LT7 TEX28P1-201ENST00000613479 1221 ntBASIC15.68■□□□□ 0.1
C9orf72Q96LT7 TEX28P2-201ENST00000617764 1221 ntBASIC15.68■□□□□ 0.1
C9orf72Q96LT7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 AL928921.2-201ENST00000641325 2442 ntBASIC15.68■□□□□ 0.1
C9orf72Q96LT7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 HSPA7-201ENST00000445535 1927 ntBASIC15.68■□□□□ 0.1
C9orf72Q96LT7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.68■□□□□ 0.1
C9orf72Q96LT7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms