Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 Z69890.1-201ENST00000382990 339 ntBASIC18.29■□□□□ 0.52
CNKSR1Q969H4 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 MIR1227-201ENST00000408484 88 ntBASIC18.29■□□□□ 0.52
CNKSR1Q969H4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 DUTP3-201ENST00000450025 415 ntBASIC18.29■□□□□ 0.52
CNKSR1Q969H4 NDUFS6P1-201ENST00000485187 316 ntBASIC18.29■□□□□ 0.52
CNKSR1Q969H4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 AC005357.2-202ENST00000590507 1060 ntBASIC18.29■□□□□ 0.52
CNKSR1Q969H4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 AL161773.1-201ENST00000624845 863 ntBASIC18.29■□□□□ 0.52
CNKSR1Q969H4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.29■□□□□ 0.52
CNKSR1Q969H4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR1Q969H4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 AP003398.1-201ENST00000531124 318 ntBASIC18.28■□□□□ 0.52
CNKSR1Q969H4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 MIR4522-201ENST00000584932 87 ntBASIC18.28■□□□□ 0.52
CNKSR1Q969H4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR1Q969H4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 AC024909.3-201ENST00000611513 2257 ntBASIC18.27■□□□□ 0.52
CNKSR1Q969H4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 AL807761.2-201ENST00000422849 729 ntBASIC18.27■□□□□ 0.52
CNKSR1Q969H4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 XBP1P1-201ENST00000436573 652 ntBASIC18.27■□□□□ 0.52
CNKSR1Q969H4 RPSAP15-201ENST00000448168 861 ntBASIC18.27■□□□□ 0.52
CNKSR1Q969H4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 AC141586.1-203ENST00000567242 366 ntBASIC18.27■□□□□ 0.52
CNKSR1Q969H4 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.27■□□□□ 0.52
CNKSR1Q969H4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNKSR1Q969H4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNKSR1Q969H4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CNKSR1Q969H4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.27■□□□□ 0.51
CNKSR1Q969H4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms