Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GCN1Q92616 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.75□□□□□ -0.37
GCN1Q92616 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
GCN1Q92616 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.75□□□□□ -0.37
GCN1Q92616 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GCN1Q92616 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC12.75□□□□□ -0.37
GCN1Q92616 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.75□□□□□ -0.37
GCN1Q92616 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC12.75□□□□□ -0.37
GCN1Q92616 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC12.75□□□□□ -0.37
GCN1Q92616 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.74□□□□□ -0.37
GCN1Q92616 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
GCN1Q92616 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.74□□□□□ -0.37
GCN1Q92616 TEKT4P2-202ENST00000559466 1312 ntBASIC12.74□□□□□ -0.37
GCN1Q92616 AC124944.3-201ENST00000607976 1304 ntBASIC12.74□□□□□ -0.37
GCN1Q92616 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GCN1Q92616 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
GCN1Q92616 RN7SKP230-201ENST00000365642 335 ntBASIC12.74□□□□□ -0.37
GCN1Q92616 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.74□□□□□ -0.37
GCN1Q92616 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC12.74□□□□□ -0.37
GCN1Q92616 NME6-211ENST00000447314 621 ntTSL 3 BASIC12.74□□□□□ -0.37
GCN1Q92616 PARVG-208ENST00000466375 820 ntTSL 2 BASIC12.74□□□□□ -0.37
GCN1Q92616 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
GCN1Q92616 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC12.74□□□□□ -0.37
GCN1Q92616 CETN3-205ENST00000522842 664 ntTSL 2 BASIC12.74□□□□□ -0.37
GCN1Q92616 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GCN1Q92616 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.74□□□□□ -0.37
GCN1Q92616 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
GCN1Q92616 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GCN1Q92616 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
GCN1Q92616 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 AC012313.1-201ENST00000593393 3059 ntBASIC12.74□□□□□ -0.37
GCN1Q92616 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
GCN1Q92616 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.74□□□□□ -0.37
GCN1Q92616 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.74□□□□□ -0.37
GCN1Q92616 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
GCN1Q92616 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCN1Q92616 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
GCN1Q92616 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
GCN1Q92616 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC12.74□□□□□ -0.37
GCN1Q92616 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC12.74□□□□□ -0.37
GCN1Q92616 PSAT1P2-201ENST00000426107 972 ntBASIC12.74□□□□□ -0.37
GCN1Q92616 ZNF877P-201ENST00000437614 612 ntBASIC12.74□□□□□ -0.37
GCN1Q92616 AP003170.2-201ENST00000544730 786 ntBASIC12.74□□□□□ -0.37
GCN1Q92616 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.74□□□□□ -0.37
GCN1Q92616 PSME3-213ENST00000592169 826 ntTSL 3 BASIC12.74□□□□□ -0.37
GCN1Q92616 AC148476.1-201ENST00000622182 705 ntBASIC12.74□□□□□ -0.37
GCN1Q92616 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.73□□□□□ -0.37
GCN1Q92616 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.73□□□□□ -0.37
GCN1Q92616 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.73□□□□□ -0.37
GCN1Q92616 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
GCN1Q92616 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 AC138392.1-201ENST00000427577 921 ntBASIC12.73□□□□□ -0.37
GCN1Q92616 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC12.73□□□□□ -0.37
GCN1Q92616 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.73□□□□□ -0.37
GCN1Q92616 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
GCN1Q92616 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
GCN1Q92616 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
GCN1Q92616 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 AL359258.3-201ENST00000622910 2331 ntBASIC12.73□□□□□ -0.37
GCN1Q92616 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms