Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 GAS7-216ENST00000583882 553 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AC116562.4-201ENST00000641316 2276 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AL136172.1-201ENST00000598590 1394 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 TMEM176A-201ENST00000004103 1261 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 MYADML-202ENST00000490394 797 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AL603764.1-201ENST00000636452 321 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 BIN3-212ENST00000640731 450 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 PCDHB18P-201ENST00000524813 2368 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AP000593.2-201ENST00000542775 1433 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 HDAC8-201ENST00000373554 833 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 TUBB2BP1-201ENST00000404155 871 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AL391903.1-201ENST00000407513 365 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AC103563.1-201ENST00000429316 123 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AL139412.1-201ENST00000441085 523 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AC018638.5-201ENST00000450885 754 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 TCP10-205ENST00000476779 646 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 COX5A-205ENST00000568517 582 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 LINC01101-201ENST00000622953 1884 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 KRT18P12-201ENST00000425245 1273 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 NOS2P2-201ENST00000426269 867 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 YY1P2-201ENST00000438766 948 ntBASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE2Q8WXH0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 MIR645-201ENST00000385283 94 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 MKL1-204ENST00000402630 747 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 RN7SL277P-201ENST00000481521 288 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC091736.1-201ENST00000609370 305 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 MDP1-201ENST00000288087 730 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms