Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 MRPL3P1-201ENST00000400109 1033 ntBASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 SPDYE17-201ENST00000412399 783 ntBASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 AC064836.3-201ENST00000607928 673 ntBASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 AL773604.1-201ENST00000617417 272 ntBASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 AC020910.6-201ENST00000623084 1459 ntBASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 CICP16-201ENST00000502609 2813 ntBASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 AC243562.1-201ENST00000560672 389 ntBASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.09■□□□□ 0.01
CKAP2Q8WWK9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms