Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 AC098859.1-201ENST00000502915 1238 ntBASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 AC116407.4-201ENST00000623319 1061 ntBASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 AC004790.2-201ENST00000623588 572 ntBASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SMIM11BQ8TCY0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
SMIM11BQ8TCY0 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 AC073548.1-201ENST00000624088 1882 ntBASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 MEX3B-202ENST00000558133 4333 ntBASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 AL031133.1-201ENST00000406807 723 ntBASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ATP6V0CP3-201ENST00000417255 467 ntBASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 AL596275.1-201ENST00000423464 877 ntBASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 AC021087.4-201ENST00000563761 564 ntBASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 HAL-202ENST00000538703 2637 ntTSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 REXO1L4P-201ENST00000605109 1937 ntBASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 AC083964.2-201ENST00000623988 2396 ntBASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms