Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AL158070.2-201ENST00000623713 1621 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AC007787.1-201ENST00000588095 1583 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AC093525.8-201ENST00000624099 1342 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 KLF2P2-201ENST00000416807 1039 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 C2orf27AP3-201ENST00000434123 579 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AP005482.1-201ENST00000563722 1273 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 SAMD11P1-201ENST00000571429 661 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AL354718.3-201ENST00000616414 581 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 CR382287.1-201ENST00000623954 586 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 AL109954.1-202ENST00000564051 2148 ntBASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GRIN3AQ8TCU5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 GNRHR2-203ENST00000581100 1187 ntBASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
GRIN3AQ8TCU5 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms