Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 CLEC4C-202ENST00000360345 970 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 PADI1-201ENST00000375471 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 OR7E109P-201ENST00000445529 855 ntBASIC9.16□□□□□ -0.94
SVIPQ8NHG7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 SKA2-207ENST00000583380 583 ntTSL 5 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 AC007292.3-201ENST00000594776 357 ntTSL 5 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 AC009812.1-201ENST00000605948 1059 ntBASIC9.16□□□□□ -0.94
SVIPQ8NHG7 AC083880.1-201ENST00000608266 535 ntBASIC9.16□□□□□ -0.94
SVIPQ8NHG7 ATP1B2-201ENST00000250111 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 ZNF565-202ENST00000355114 2519 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 KLHL15-201ENST00000328046 6272 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 SLAMF7-204ENST00000441662 2497 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 TACC2-201ENST00000260733 3644 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 BPNT1-210ENST00000544404 2379 ntTSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 NLRP3-205ENST00000391827 2940 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 TRMT10B-201ENST00000297994 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 HADHAP1-201ENST00000514498 2284 ntBASIC9.16□□□□□ -0.94
SVIPQ8NHG7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 OSBPL6-205ENST00000392505 3637 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 SDHAP1-207ENST00000440850 2000 ntBASIC9.15□□□□□ -0.94
SVIPQ8NHG7 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 WDR81-201ENST00000309182 3808 ntTSL 2 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 R3HDM2-205ENST00000403821 3347 ntTSL 5 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 COG4-201ENST00000323786 2833 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 NFASC-201ENST00000339876 10333 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 PIK3R3-204ENST00000423209 1884 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 ADGRE3-202ENST00000344373 2267 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 APOBEC3F-201ENST00000308521 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 MICU1-212ENST00000642044 2221 ntBASIC9.15□□□□□ -0.94
SVIPQ8NHG7 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 LINC00265-201ENST00000340510 3049 ntTSL 5 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 CRYZP1-201ENST00000428923 947 ntBASIC9.15□□□□□ -0.94
SVIPQ8NHG7 BTG3P1-201ENST00000435859 716 ntBASIC9.15□□□□□ -0.94
SVIPQ8NHG7 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 WNT3-201ENST00000225512 3355 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 HSPD1P10-201ENST00000404829 1676 ntBASIC9.15□□□□□ -0.94
SVIPQ8NHG7 GGT3P-204ENST00000453783 1664 ntBASIC9.15□□□□□ -0.94
SVIPQ8NHG7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 C1orf131-201ENST00000318906 2483 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 XPNPEP2-202ENST00000371106 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SVIPQ8NHG7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 AC008677.1-201ENST00000519230 1561 ntBASIC9.15□□□□□ -0.95
SVIPQ8NHG7 GPR155-201ENST00000295500 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 DAPK1-219ENST00000622514 5772 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms