Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SIX5Q8N196 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 AL645937.2-201ENST00000396808 931 ntBASIC15.56■□□□□ 0.08
SIX5Q8N196 AC098935.1-201ENST00000446057 611 ntBASIC15.56■□□□□ 0.08
SIX5Q8N196 NOC2LP1-201ENST00000450578 752 ntBASIC15.56■□□□□ 0.08
SIX5Q8N196 AC004066.1-201ENST00000502488 802 ntBASIC15.56■□□□□ 0.08
SIX5Q8N196 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.56■□□□□ 0.08
SIX5Q8N196 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.56■□□□□ 0.08
SIX5Q8N196 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 AC106820.3-201ENST00000561653 397 ntBASIC15.56■□□□□ 0.08
SIX5Q8N196 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SIX5Q8N196 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SIX5Q8N196 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.56■□□□□ 0.08
SIX5Q8N196 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.56■□□□□ 0.08
SIX5Q8N196 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.56■□□□□ 0.08
SIX5Q8N196 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SIX5Q8N196 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.56■□□□□ 0.08
SIX5Q8N196 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 AC007787.1-201ENST00000588095 1583 ntBASIC15.56■□□□□ 0.08
SIX5Q8N196 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 AC132872.4-202ENST00000622924 2756 ntBASIC15.56■□□□□ 0.08
SIX5Q8N196 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
SIX5Q8N196 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.55■□□□□ 0.08
SIX5Q8N196 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SIX5Q8N196 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SIX5Q8N196 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 AC011477.6-201ENST00000604980 1927 ntBASIC15.55■□□□□ 0.08
SIX5Q8N196 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SIX5Q8N196 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SIX5Q8N196 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.55■□□□□ 0.08
SIX5Q8N196 AL136309.1-201ENST00000403917 691 ntBASIC15.55■□□□□ 0.08
SIX5Q8N196 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.55■□□□□ 0.08
SIX5Q8N196 GHSR-202ENST00000427970 912 ntBASIC15.55■□□□□ 0.08
SIX5Q8N196 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.55■□□□□ 0.08
SIX5Q8N196 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC15.55■□□□□ 0.08
SIX5Q8N196 CEP164P1-201ENST00000455142 418 ntBASIC15.55■□□□□ 0.08
SIX5Q8N196 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.55■□□□□ 0.08
SIX5Q8N196 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.55■□□□□ 0.08
SIX5Q8N196 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.55■□□□□ 0.08
SIX5Q8N196 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.55■□□□□ 0.08
SIX5Q8N196 AC019193.1-201ENST00000506678 823 ntBASIC15.55■□□□□ 0.08
SIX5Q8N196 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SIX5Q8N196 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.55■□□□□ 0.08
SIX5Q8N196 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SIX5Q8N196 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.55■□□□□ 0.08
SIX5Q8N196 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.55■□□□□ 0.08
SIX5Q8N196 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 PGAM1P5-201ENST00000548011 764 ntBASIC15.55■□□□□ 0.08
SIX5Q8N196 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
SIX5Q8N196 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.55■□□□□ 0.08
SIX5Q8N196 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIX5Q8N196 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SIX5Q8N196 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
SIX5Q8N196 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.54■□□□□ 0.08
SIX5Q8N196 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SIX5Q8N196 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SIX5Q8N196 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms