Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 AC239868.1-201ENST00000369385 493 ntBASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 POU5F1P2-201ENST00000521750 823 ntBASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 AC018635.2-201ENST00000608625 364 ntBASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 BX088702.1-201ENST00000610784 235 ntBASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 AC027601.3-201ENST00000622907 509 ntBASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
NPAS4Q8IUM7 AC020658.6-201ENST00000623564 1870 ntBASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 AC092978.1-202ENST00000637590 1327 ntBASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms