Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 HLA-K-203ENST00000430151 1046 ntBASIC14.06□□□□□ -0.16
VRK2Q86Y07 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 RFPL4AP1-201ENST00000530883 850 ntBASIC14.06□□□□□ -0.16
VRK2Q86Y07 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 AC117489.1-201ENST00000625169 3217 ntBASIC14.06□□□□□ -0.16
VRK2Q86Y07 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 AL137783.1-201ENST00000623494 1896 ntBASIC14.06□□□□□ -0.16
VRK2Q86Y07 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 AC113367.3-201ENST00000508316 1912 ntBASIC14.05□□□□□ -0.16
VRK2Q86Y07 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK2Q86Y07 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK2Q86Y07 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms