Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 TTTY23B-201ENST00000442790 549 ntBASIC13.48□□□□□ -0.25
RTTNQ86VV8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 AC023024.2-201ENST00000623561 1993 ntBASIC13.48□□□□□ -0.25
RTTNQ86VV8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 RRP7BP-205ENST00000566851 833 ntBASIC13.48□□□□□ -0.25
RTTNQ86VV8 AC103810.3-201ENST00000583567 96 ntBASIC13.48□□□□□ -0.25
RTTNQ86VV8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 MIR6775-201ENST00000617557 69 ntBASIC13.48□□□□□ -0.25
RTTNQ86VV8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RTTNQ86VV8 AC023157.3-201ENST00000619086 2088 ntBASIC13.48□□□□□ -0.25
RTTNQ86VV8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTTNQ86VV8 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 MIR1247-201ENST00000408206 136 ntBASIC13.47□□□□□ -0.25
RTTNQ86VV8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 TIMM17BP1-201ENST00000545713 516 ntBASIC13.47□□□□□ -0.25
RTTNQ86VV8 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTTNQ86VV8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RTTNQ86VV8 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms