Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 AC023310.1-201ENST00000554836 735 ntBASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 AHCYP2-201ENST00000430630 1300 ntBASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 AL354989.2-201ENST00000435838 1540 ntBASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LRRTM4Q86VH4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 AC026954.1-201ENST00000429771 1293 ntBASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 AC008687.7-202ENST00000637404 953 ntBASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 AC091951.1-201ENST00000512854 2465 ntBASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 ZBED1P1-201ENST00000502364 1930 ntBASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LRRTM4Q86VH4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 MIR1202-201ENST00000408529 83 ntBASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms