Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 AC004898.1-201ENST00000451057 766 ntBASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE3BQ7Z3V4 AC003102.2-201ENST00000589195 1469 ntBASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 AL354877.1-201ENST00000424412 413 ntBASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 AL136301.1-201ENST00000615830 422 ntBASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3BQ7Z3V4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBE3BQ7Z3V4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.77■□□□□ 0.59
UBE3BQ7Z3V4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
UBE3BQ7Z3V4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBE3BQ7Z3V4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBE3BQ7Z3V4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.77■□□□□ 0.59
UBE3BQ7Z3V4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 MIR4783-201ENST00000580343 82 ntBASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 AC007663.3-201ENST00000609632 465 ntBASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE3BQ7Z3V4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms