Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 AC013268.4-201ENST00000637413 2228 ntBASIC14.57□□□□□ -0.08
RNF44Q7L0R7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF44Q7L0R7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 AP000845.1-201ENST00000581677 2131 ntBASIC14.56□□□□□ -0.08
RNF44Q7L0R7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 MST1L-201ENST00000442552 2185 ntBASIC14.56□□□□□ -0.08
RNF44Q7L0R7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 GK-202ENST00000378941 458 ntTSL 3 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 EIF3FP3-201ENST00000434851 1086 ntBASIC14.56□□□□□ -0.08
RNF44Q7L0R7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 DUX4L47-201ENST00000566374 394 ntBASIC14.56□□□□□ -0.08
RNF44Q7L0R7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 AL157414.3-201ENST00000624276 1954 ntBASIC14.56□□□□□ -0.08
RNF44Q7L0R7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 REXO1L5P-201ENST00000622260 2098 ntBASIC14.56□□□□□ -0.08
RNF44Q7L0R7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RNF44Q7L0R7 AC092384.3-202ENST00000564646 2873 ntBASIC14.56□□□□□ -0.08
RNF44Q7L0R7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.55□□□□□ -0.08
RNF44Q7L0R7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 C2orf27AP3-201ENST00000434123 579 ntBASIC14.55□□□□□ -0.08
RNF44Q7L0R7 AC016694.1-201ENST00000434179 700 ntBASIC14.55□□□□□ -0.08
RNF44Q7L0R7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 IGHV3-71-201ENST00000523324 359 ntBASIC14.55□□□□□ -0.08
RNF44Q7L0R7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms