Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 AC005912.2-201ENST00000619492 2400 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 PDIA3P1-201ENST00000471856 1510 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 LINC01101-201ENST00000622953 1884 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 ANKRD19P-201ENST00000338192 862 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 AC092933.1-201ENST00000393644 945 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 AP005019.2-201ENST00000615104 511 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 MIR6775-201ENST00000617557 69 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 AL158070.2-201ENST00000623713 1621 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 C18orf15-201ENST00000623680 2534 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 FTH1P14-201ENST00000482930 551 ntBASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 SAMD11P1-201ENST00000571429 661 ntBASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 MIR4259-201ENST00000584466 101 ntBASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 GRK6P1-201ENST00000400595 1711 ntBASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 AC112693.3-201ENST00000624819 1983 ntBASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD3Q6PCD5 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.83■□□□□ 0.13
RFWD3Q6PCD5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFWD3Q6PCD5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
RFWD3Q6PCD5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFWD3Q6PCD5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFWD3Q6PCD5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.83■□□□□ 0.13
RFWD3Q6PCD5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
RFWD3Q6PCD5 AC148477.4-201ENST00000613430 1793 ntBASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms