Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 AC112504.1-201ENST00000623415 1841 ntBASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 AL139400.1-201ENST00000366220 510 ntBASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 FAM86GP-201ENST00000448322 971 ntBASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 RN7SL828P-201ENST00000607615 303 ntBASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 Z92544.3-201ENST00000624747 417 ntBASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 TUBB3P1-201ENST00000405796 1332 ntBASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms