Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42BPAQ5VT25 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 AC141586.1-203ENST00000567242 366 ntBASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42BPAQ5VT25 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 AC004837.1-201ENST00000446267 564 ntBASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 CR383656.3-201ENST00000551315 183 ntBASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 AC138701.2-201ENST00000553634 226 ntBASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 MT3-203ENST00000565838 421 ntTSL 3 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 MIR3180-2-201ENST00000581748 88 ntBASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42BPAQ5VT25 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 AC005357.2-202ENST00000590507 1060 ntBASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42BPAQ5VT25 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms