Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 AL136309.1-201ENST00000403917 691 ntBASIC16.05■□□□□ 0.16
VARS2Q5ST30 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 POM121L10P-201ENST00000436994 1285 ntBASIC16.05■□□□□ 0.16
VARS2Q5ST30 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 IGHJ2P-201ENST00000454480 60 ntBASIC16.05■□□□□ 0.16
VARS2Q5ST30 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 AC084782.3-201ENST00000612282 578 ntBASIC16.05■□□□□ 0.16
VARS2Q5ST30 AP001002.3-201ENST00000623482 206 ntBASIC16.05■□□□□ 0.16
VARS2Q5ST30 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.04■□□□□ 0.16
VARS2Q5ST30 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.04■□□□□ 0.16
VARS2Q5ST30 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 AC122134.1-202ENST00000569111 1201 ntBASIC16.04■□□□□ 0.16
VARS2Q5ST30 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 AC073575.2-201ENST00000614212 627 ntBASIC16.04■□□□□ 0.16
VARS2Q5ST30 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARS2Q5ST30 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
VARS2Q5ST30 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AL355578.1-201ENST00000607405 1328 ntBASIC16.03■□□□□ 0.16
VARS2Q5ST30 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AL355994.1-201ENST00000424379 260 ntBASIC16.03■□□□□ 0.16
VARS2Q5ST30 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.03■□□□□ 0.16
VARS2Q5ST30 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AC092905.1-201ENST00000467527 949 ntBASIC16.03■□□□□ 0.16
VARS2Q5ST30 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AC100850.1-201ENST00000506768 649 ntBASIC16.03■□□□□ 0.16
VARS2Q5ST30 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AC079328.1-201ENST00000560358 952 ntBASIC16.03■□□□□ 0.16
VARS2Q5ST30 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms