Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 VENTXP4-201ENST00000449029 958 ntBASIC12.88□□□□□ -0.35
LRRK2Q5S007 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AC092127.1-201ENST00000567093 3455 ntBASIC12.87□□□□□ -0.35
LRRK2Q5S007 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 XBP1P1-201ENST00000436573 652 ntBASIC12.87□□□□□ -0.35
LRRK2Q5S007 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AC006122.1-201ENST00000493323 440 ntBASIC12.87□□□□□ -0.35
LRRK2Q5S007 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AP000322.3-201ENST00000608665 388 ntBASIC12.87□□□□□ -0.35
LRRK2Q5S007 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 RNA5SP359-201ENST00000364838 113 ntBASIC12.87□□□□□ -0.35
LRRK2Q5S007 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 ABHD17AP9-201ENST00000561925 548 ntBASIC12.87□□□□□ -0.35
LRRK2Q5S007 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 AC009145.4-201ENST00000625119 1294 ntBASIC12.87□□□□□ -0.35
LRRK2Q5S007 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRK2Q5S007 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.87□□□□□ -0.35
LRRK2Q5S007 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 CCL25-202ENST00000315626 450 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 RPL18AP8-201ENST00000486071 528 ntBASIC12.86□□□□□ -0.35
LRRK2Q5S007 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 AC080013.5-201ENST00000607044 679 ntBASIC12.86□□□□□ -0.35
LRRK2Q5S007 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms