Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 MIR769-201ENST00000390225 118 ntBASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 AC245884.6-201ENST00000515672 1067 ntBASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 AC136759.1-202ENST00000530858 2194 ntBASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 AC132192.2-201ENST00000596206 1147 ntBASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 AC090164.2-201ENST00000611487 516 ntBASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 AL023803.2-201ENST00000620080 638 ntBASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 AC138035.3-201ENST00000622706 2791 ntBASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM1Q2M3G4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 AC012618.1-201ENST00000461223 412 ntBASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 RN7SL769P-201ENST00000469386 295 ntBASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 RN7SL720P-201ENST00000488178 304 ntBASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 AC134698.3-201ENST00000523880 214 ntBASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 AC126365.1-201ENST00000578585 1514 ntBASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM1Q2M3G4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 AC006058.4-201ENST00000624016 1670 ntBASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms