Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 MIR557-201ENST00000385239 98 ntBASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AC004522.1-201ENST00000419978 654 ntBASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AC093909.3-201ENST00000504783 336 ntBASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 MIR5001-201ENST00000580185 100 ntBASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AL157813.1-201ENST00000612996 587 ntBASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AC011471.3-201ENST00000623576 402 ntBASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AP001184.1-201ENST00000637936 376 ntBASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 HYMAI-201ENST00000635591 3347 ntBASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC015909.3-201ENST00000572855 1794 ntBASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC010141.1-201ENST00000411585 623 ntBASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC005962.1-201ENST00000584100 773 ntBASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC007326.1-201ENST00000604539 458 ntBASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC004686.1-201ENST00000605113 538 ntBASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 DOC2GP-204ENST00000639052 2548 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms