Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.86□□□□□ -0.03
CDK3Q00526 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.86□□□□□ -0.03
CDK3Q00526 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.86□□□□□ -0.03
CDK3Q00526 ZACNP1-201ENST00000612259 710 ntBASIC14.86□□□□□ -0.03
CDK3Q00526 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.86□□□□□ -0.03
CDK3Q00526 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDK3Q00526 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CDK3Q00526 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 AL023775.1-201ENST00000454907 1746 ntBASIC14.86□□□□□ -0.03
CDK3Q00526 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.86□□□□□ -0.03
CDK3Q00526 ZBED1P1-201ENST00000502364 1930 ntBASIC14.86□□□□□ -0.03
CDK3Q00526 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.86□□□□□ -0.03
CDK3Q00526 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CDK3Q00526 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 KRT8P4-201ENST00000509735 1454 ntBASIC14.85□□□□□ -0.03
CDK3Q00526 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.85□□□□□ -0.03
CDK3Q00526 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 MIR326-201ENST00000362220 95 ntBASIC14.85□□□□□ -0.03
CDK3Q00526 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDK3Q00526 GOLGA2P4-201ENST00000441462 777 ntBASIC14.85□□□□□ -0.03
CDK3Q00526 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.85□□□□□ -0.03
CDK3Q00526 MIR4538-201ENST00000581377 78 ntBASIC14.85□□□□□ -0.03
CDK3Q00526 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.85□□□□□ -0.03
CDK3Q00526 AC138696.2-201ENST00000607376 223 ntBASIC14.85□□□□□ -0.03
CDK3Q00526 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
CDK3Q00526 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.85□□□□□ -0.03
CDK3Q00526 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDK3Q00526 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CDK3Q00526 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CDK3Q00526 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.85□□□□□ -0.03
CDK3Q00526 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDK3Q00526 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.85□□□□□ -0.03
CDK3Q00526 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.84□□□□□ -0.03
CDK3Q00526 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.84□□□□□ -0.03
CDK3Q00526 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CDK3Q00526 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDK3Q00526 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CDK3Q00526 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDK3Q00526 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.84□□□□□ -0.03
CDK3Q00526 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDK3Q00526 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CDK3Q00526 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDK3Q00526 ACE3P-201ENST00000423435 1973 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms