Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
VSX2P58304 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.56□□□□□ -0.08
VSX2P58304 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 SNX29P1-201ENST00000548357 1007 ntBASIC14.56□□□□□ -0.08
VSX2P58304 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.56□□□□□ -0.08
VSX2P58304 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 AL008721.1-201ENST00000609964 604 ntBASIC14.56□□□□□ -0.08
VSX2P58304 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 KRT8P14-201ENST00000414254 1442 ntBASIC14.56□□□□□ -0.08
VSX2P58304 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.56□□□□□ -0.08
VSX2P58304 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
VSX2P58304 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.55□□□□□ -0.08
VSX2P58304 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.55□□□□□ -0.08
VSX2P58304 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VSX2P58304 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
VSX2P58304 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.55□□□□□ -0.08
VSX2P58304 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.55□□□□□ -0.08
VSX2P58304 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
VSX2P58304 AC022210.1-201ENST00000449856 793 ntBASIC14.55□□□□□ -0.08
VSX2P58304 KLF2P4-201ENST00000451959 1225 ntBASIC14.55□□□□□ -0.08
VSX2P58304 CTBP2P5-201ENST00000454986 1264 ntBASIC14.55□□□□□ -0.08
VSX2P58304 AC104989.1-201ENST00000519711 778 ntBASIC14.55□□□□□ -0.08
VSX2P58304 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.55□□□□□ -0.08
VSX2P58304 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.55□□□□□ -0.08
VSX2P58304 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.55□□□□□ -0.08
VSX2P58304 GNRHR2-203ENST00000581100 1187 ntBASIC14.55□□□□□ -0.08
VSX2P58304 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.55□□□□□ -0.08
VSX2P58304 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.55□□□□□ -0.08
VSX2P58304 MIR6805-201ENST00000615055 62 ntBASIC14.55□□□□□ -0.08
VSX2P58304 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
VSX2P58304 MIR6775-201ENST00000617557 69 ntBASIC14.55□□□□□ -0.08
VSX2P58304 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.55□□□□□ -0.08
VSX2P58304 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.55□□□□□ -0.08
VSX2P58304 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 AC013268.4-201ENST00000637413 2228 ntBASIC14.55□□□□□ -0.08
VSX2P58304 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
VSX2P58304 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
VSX2P58304 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
VSX2P58304 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.55□□□□□ -0.08
VSX2P58304 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VSX2P58304 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms