Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 AC099063.4-201ENST00000641099 1602 ntBASIC15.32■□□□□ 0.04
WNT3AP56704 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
WNT3AP56704 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
WNT3AP56704 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
WNT3AP56704 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 AC098614.1-201ENST00000368528 745 ntBASIC15.32■□□□□ 0.04
WNT3AP56704 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.32■□□□□ 0.04
WNT3AP56704 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
WNT3AP56704 EIF3FP3-201ENST00000434851 1086 ntBASIC15.32■□□□□ 0.04
WNT3AP56704 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 AC022137.2-201ENST00000503482 481 ntBASIC15.32■□□□□ 0.04
WNT3AP56704 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.32■□□□□ 0.04
WNT3AP56704 KRT18P25-201ENST00000508931 1278 ntBASIC15.32■□□□□ 0.04
WNT3AP56704 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.32■□□□□ 0.04
WNT3AP56704 AC009486.1-201ENST00000569860 813 ntBASIC15.32■□□□□ 0.04
WNT3AP56704 MIR3197-201ENST00000582241 73 ntBASIC15.32■□□□□ 0.04
WNT3AP56704 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.32■□□□□ 0.04
WNT3AP56704 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.32■□□□□ 0.04
WNT3AP56704 AC027307.3-201ENST00000594262 1100 ntBASIC15.32■□□□□ 0.04
WNT3AP56704 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.32■□□□□ 0.04
WNT3AP56704 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
WNT3AP56704 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
WNT3AP56704 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.32■□□□□ 0.04
WNT3AP56704 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.32■□□□□ 0.04
WNT3AP56704 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
WNT3AP56704 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
WNT3AP56704 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WNT3AP56704 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WNT3AP56704 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 ACTBP8-201ENST00000403258 1108 ntBASIC15.31■□□□□ 0.04
WNT3AP56704 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
WNT3AP56704 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT3AP56704 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT3AP56704 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT3AP56704 AC026434.2-201ENST00000506094 1078 ntBASIC15.31■□□□□ 0.04
WNT3AP56704 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT3AP56704 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT3AP56704 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT3AP56704 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 LRRC59-203ENST00000576448 1531 ntBASIC15.31■□□□□ 0.04
WNT3AP56704 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms