Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GFRA1P56159 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GFRA1P56159 FAM86HP-204ENST00000513466 959 ntBASIC13.54□□□□□ -0.24
GFRA1P56159 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GFRA1P56159 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.54□□□□□ -0.24
GFRA1P56159 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 AP006547.1-201ENST00000563435 692 ntBASIC13.54□□□□□ -0.24
GFRA1P56159 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.54□□□□□ -0.24
GFRA1P56159 MIR4741-201ENST00000579822 90 ntBASIC13.54□□□□□ -0.24
GFRA1P56159 EEF1DP1-201ENST00000585891 896 ntBASIC13.54□□□□□ -0.24
GFRA1P56159 ZACNP1-201ENST00000612259 710 ntBASIC13.54□□□□□ -0.24
GFRA1P56159 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.54□□□□□ -0.24
GFRA1P56159 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
GFRA1P56159 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
GFRA1P56159 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GFRA1P56159 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
GFRA1P56159 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GFRA1P56159 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GFRA1P56159 AC023157.3-201ENST00000619086 2088 ntBASIC13.54□□□□□ -0.24
GFRA1P56159 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GFRA1P56159 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
GFRA1P56159 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.53□□□□□ -0.24
GFRA1P56159 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.53□□□□□ -0.24
GFRA1P56159 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GFRA1P56159 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
GFRA1P56159 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.53□□□□□ -0.24
GFRA1P56159 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.53□□□□□ -0.24
GFRA1P56159 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.53□□□□□ -0.24
GFRA1P56159 Z93015.1-201ENST00000451718 390 ntBASIC13.53□□□□□ -0.24
GFRA1P56159 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.53□□□□□ -0.24
GFRA1P56159 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.53□□□□□ -0.24
GFRA1P56159 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.53□□□□□ -0.24
GFRA1P56159 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.53□□□□□ -0.24
GFRA1P56159 PPY2P-201ENST00000582808 702 ntBASIC13.53□□□□□ -0.24
GFRA1P56159 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.53□□□□□ -0.24
GFRA1P56159 MIR6799-201ENST00000620297 69 ntBASIC13.53□□□□□ -0.24
GFRA1P56159 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.53□□□□□ -0.24
GFRA1P56159 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
GFRA1P56159 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.53□□□□□ -0.24
GFRA1P56159 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.53□□□□□ -0.24
GFRA1P56159 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GFRA1P56159 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GFRA1P56159 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GFRA1P56159 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.52□□□□□ -0.24
GFRA1P56159 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.52□□□□□ -0.24
GFRA1P56159 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GFRA1P56159 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
GFRA1P56159 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GFRA1P56159 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.52□□□□□ -0.24
GFRA1P56159 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms