Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.49□□□□□ -0.09
NR1H2P55055 RBPMS2P1-201ENST00000437762 623 ntBASIC14.49□□□□□ -0.09
NR1H2P55055 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.49□□□□□ -0.09
NR1H2P55055 COX20P2-201ENST00000452636 358 ntBASIC14.49□□□□□ -0.09
NR1H2P55055 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.49□□□□□ -0.09
NR1H2P55055 AC069262.1-201ENST00000539058 672 ntBASIC14.49□□□□□ -0.09
NR1H2P55055 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.49□□□□□ -0.09
NR1H2P55055 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.49□□□□□ -0.09
NR1H2P55055 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NR1H2P55055 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NR1H2P55055 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 AC008267.7-201ENST00000624570 1194 ntBASIC14.49□□□□□ -0.09
NR1H2P55055 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.49□□□□□ -0.09
NR1H2P55055 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
NR1H2P55055 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
NR1H2P55055 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
NR1H2P55055 AP001267.2-201ENST00000532619 2086 ntBASIC14.49□□□□□ -0.09
NR1H2P55055 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.49□□□□□ -0.09
NR1H2P55055 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.49□□□□□ -0.09
NR1H2P55055 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
NR1H2P55055 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.49□□□□□ -0.09
NR1H2P55055 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
NR1H2P55055 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NR1H2P55055 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H2P55055 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NR1H2P55055 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.48□□□□□ -0.09
NR1H2P55055 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H2P55055 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H2P55055 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H2P55055 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NR1H2P55055 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NR1H2P55055 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.48□□□□□ -0.09
NR1H2P55055 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.48□□□□□ -0.09
NR1H2P55055 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H2P55055 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.48□□□□□ -0.09
NR1H2P55055 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NR1H2P55055 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
NR1H2P55055 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
NR1H2P55055 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.48□□□□□ -0.09
NR1H2P55055 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.48□□□□□ -0.09
NR1H2P55055 AC005498.2-205ENST00000593218 784 ntBASIC14.48□□□□□ -0.09
NR1H2P55055 AC239800.4-201ENST00000603712 296 ntBASIC14.48□□□□□ -0.09
NR1H2P55055 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NR1H2P55055 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H2P55055 AC084121.4-201ENST00000641598 221 ntBASIC14.48□□□□□ -0.09
NR1H2P55055 AF228730.8-201ENST00000642140 221 ntBASIC14.48□□□□□ -0.09
NR1H2P55055 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H2P55055 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NR1H2P55055 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H2P55055 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H2P55055 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.47□□□□□ -0.09
NR1H2P55055 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms