Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
EPHA4P54764 AC073413.1-201ENST00000603927 732 ntBASIC14.59□□□□□ -0.07
EPHA4P54764 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.59□□□□□ -0.07
EPHA4P54764 AC005695.3-201ENST00000614522 232 ntBASIC14.59□□□□□ -0.07
EPHA4P54764 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
EPHA4P54764 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 AL133338.1-201ENST00000565695 1517 ntBASIC14.59□□□□□ -0.07
EPHA4P54764 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.59□□□□□ -0.07
EPHA4P54764 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
EPHA4P54764 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.59□□□□□ -0.07
EPHA4P54764 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.59□□□□□ -0.07
EPHA4P54764 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.59□□□□□ -0.07
EPHA4P54764 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.59□□□□□ -0.07
EPHA4P54764 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
EPHA4P54764 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.59□□□□□ -0.07
EPHA4P54764 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA4P54764 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA4P54764 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.58□□□□□ -0.07
EPHA4P54764 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA4P54764 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA4P54764 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA4P54764 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA4P54764 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA4P54764 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA4P54764 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA4P54764 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 MIR1247-201ENST00000408206 136 ntBASIC14.58□□□□□ -0.08
EPHA4P54764 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.58□□□□□ -0.08
EPHA4P54764 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.58□□□□□ -0.08
EPHA4P54764 HSPB1P2-201ENST00000448722 546 ntBASIC14.58□□□□□ -0.08
EPHA4P54764 KRT8P13-201ENST00000463294 1010 ntBASIC14.58□□□□□ -0.08
EPHA4P54764 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.58□□□□□ -0.08
EPHA4P54764 AC026434.2-201ENST00000506094 1078 ntBASIC14.58□□□□□ -0.08
EPHA4P54764 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
EPHA4P54764 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.58□□□□□ -0.08
EPHA4P54764 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA4P54764 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA4P54764 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.58□□□□□ -0.08
EPHA4P54764 AL118558.3-201ENST00000607414 1079 ntBASIC14.58□□□□□ -0.08
EPHA4P54764 AC244093.1-201ENST00000610837 814 ntBASIC14.58□□□□□ -0.08
EPHA4P54764 AL008638.5-201ENST00000623814 1298 ntBASIC14.58□□□□□ -0.08
EPHA4P54764 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
EPHA4P54764 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
EPHA4P54764 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.58□□□□□ -0.08
EPHA4P54764 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA4P54764 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA4P54764 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA4P54764 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.58□□□□□ -0.08
EPHA4P54764 TMBIM7P-203ENST00000641617 1718 ntBASIC14.58□□□□□ -0.08
EPHA4P54764 AP000593.2-201ENST00000542775 1433 ntBASIC14.58□□□□□ -0.08
EPHA4P54764 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA4P54764 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA4P54764 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.57□□□□□ -0.08
EPHA4P54764 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA4P54764 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA4P54764 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
EPHA4P54764 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA4P54764 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA4P54764 AL157414.3-201ENST00000624276 1954 ntBASIC14.57□□□□□ -0.08
EPHA4P54764 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA4P54764 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
EPHA4P54764 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
EPHA4P54764 MIR663B-201ENST00000408361 115 ntBASIC14.57□□□□□ -0.08
EPHA4P54764 GPAA1P2-201ENST00000417923 928 ntBASIC14.57□□□□□ -0.08
EPHA4P54764 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.57□□□□□ -0.08
EPHA4P54764 POM121L10P-201ENST00000436994 1285 ntBASIC14.57□□□□□ -0.08
EPHA4P54764 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.57□□□□□ -0.08
EPHA4P54764 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.57□□□□□ -0.08
EPHA4P54764 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.57□□□□□ -0.08
EPHA4P54764 AC004898.1-201ENST00000451057 766 ntBASIC14.57□□□□□ -0.08
EPHA4P54764 AC104306.2-201ENST00000451877 341 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms